Here is a provisional edition of the amended proposal on the official website of the European Parliament.
Better make sure the differences are not significant in any way or are obvious mistakes on the part of the EP website.
The better amended directive page is now at: http://swpat.ffii.org/papers/europarl0309/
I think this page should just refer there.
More links: http://wiki.ael.be/index.php/SwpatDirective